Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 26007
Gene Symbol: TKFC
TKFC
0.300 Biomarker disease GENOMICS_ENGLAND Shared phenotypes between affected individuals with TKFC deficiency include cataracts and developmental delay, associated with cerebellar hypoplasia in one case. 32004446 2020
Entrez Id: 9698
Gene Symbol: PUM1
PUM1
0.300 Biomarker disease GENOMICS_ENGLAND PUM1 haploinsufficiency is associated with syndromic neurodevelopmental delay and epilepsy. 31859446 2020
Entrez Id: 56729
Gene Symbol: RETN
RETN
0.010 AlteredExpression disease BEFREE Resistin and PAI-1 levels were significantly higher in the group with "regression plus a developmental delay" onset (Reg+DD group) compared to groups without regression or with regression without a developmental delay (<i>p</i> < 0.01 for all). 31835709 2019
Entrez Id: 5054
Gene Symbol: SERPINE1
SERPINE1
0.010 AlteredExpression disease BEFREE Resistin and PAI-1 levels were significantly higher in the group with "regression plus a developmental delay" onset (Reg+DD group) compared to groups without regression or with regression without a developmental delay (<i>p</i> < 0.01 for all). 31835709 2019
Entrez Id: 157680
Gene Symbol: VPS13B
VPS13B
0.110 GeneticVariation disease BEFREE Here we report a novel homozygous nonsense mutation in the VPS13B gene and previously undescribed clinical features in a 19-year-old woman with developmental delay, intellectual disability, and a particular facial appearance. 31825161 2020
Entrez Id: 7360
Gene Symbol: UGP2
UGP2
0.300 Biomarker disease GENOMICS_ENGLAND Loss of UGP2 in brain leads to a severe epileptic encephalopathy, emphasizing that bi-allelic isoform-specific start-loss mutations of essential genes can cause genetic diseases. 31820119 2020
Entrez Id: 9343
Gene Symbol: EFTUD2
EFTUD2
0.110 GeneticVariation disease BEFREE We identified a novel frameshift variant of EFTUD2 (c.1030_1031delTG, p.Trp344fs*2) in an MFDM Chinese patient with craniofacial dysmorphism including ear canal structures and microcephaly, mild intellectual disability, and developmental delay. 31806011 2019
Entrez Id: 84148
Gene Symbol: KAT8
KAT8
0.300 Biomarker disease GENOMICS_ENGLAND Lysine acetyltransferase 8 is involved in cerebral development and syndromic intellectual disability. 31794431 2020
Entrez Id: 55074
Gene Symbol: OXR1
OXR1
0.310 GeneticVariation disease BEFREE We identified bi-allelic loss-of-function (LoF) variants in Oxidative Resistance 1 (OXR1) in five individuals from three families; these individuals presented with a history of severe global developmental delay, current intellectual disability, language delay, cerebellar atrophy, and seizures. 31785787 2019
Entrez Id: 1460
Gene Symbol: CSNK2B
CSNK2B
0.020 GeneticVariation disease BEFREE Variants in CSNK2B associated with epilepsy and/or intellectual disability (ID)/developmental delay (DD) have been reported in five cases only. 31784560 2019
Entrez Id: 9378
Gene Symbol: NRXN1
NRXN1
0.060 GeneticVariation disease BEFREE NRXN1 copy number variation is a rare genetic factor commonly shared among autism spectrum disorder (ASD), schizophrenia, intellectual disability, epilepsy and developmental delay. 31759289 2019
Entrez Id: 87178
Gene Symbol: PNPT1
PNPT1
0.300 Biomarker disease GENOMICS_ENGLAND Clinical Spectrum and Functional Consequences Associated with Bi-Allelic Pathogenic PNPT1 Variants. 31752325 2019
Entrez Id: 26278
Gene Symbol: SACS
SACS
0.010 GeneticVariation disease BEFREE Patients with SACS variants demonstrated developmental delay and progressive ataxia before the age of 3. 31741144 2020
Entrez Id: 23512
Gene Symbol: SUZ12
SUZ12
0.400 Biomarker disease GENOMICS_ENGLAND PRC2-complex related dysfunction in overgrowth syndromes: A review of EZH2, EED, and SUZ12 and their syndromic phenotypes. 31724824 2019
Entrez Id: 81609
Gene Symbol: SNX27
SNX27
0.310 GeneticVariation disease BEFREE Sorting nexin 27 (SNX27) variants associated with seizures, developmental delay, behavioral disturbance, and subcortical brain abnormalities. 31721175 2020
Entrez Id: 2782
Gene Symbol: GNB1
GNB1
0.420 GeneticVariation disease BEFREE Notably, pathogenic substitutions of the homologous Gly77 residue including an identical variant (p.Gly77Arg, p.Gly77Val, p.Gly77Ser, p.Gly77Ala) of GNB1, a paralog of GNB2, was reported in individuals with global developmental delay and hypotonia. 31698099 2019
Entrez Id: 2783
Gene Symbol: GNB2
GNB2
0.010 GeneticVariation disease BEFREE Our study suggests that a GNB2 variant may be associated with syndromic global developmental delay. 31698099 2019
Entrez Id: 2332
Gene Symbol: FMR1
FMR1
0.200 Biomarker disease BEFREE Fragile X mental retardation gene (Fmr1) knock-out (KO) mice display core deficits of FXS, including abnormally increased sound-evoked responses, and show a delayed development of parvalbumin (PV) cells. 31698054 2020
Entrez Id: 5816
Gene Symbol: PVALB
PVALB
0.010 Biomarker disease BEFREE Fragile X mental retardation gene (Fmr1) knock-out (KO) mice display core deficits of FXS, including abnormally increased sound-evoked responses, and show a delayed development of parvalbumin (PV) cells. 31698054 2020
Entrez Id: 57689
Gene Symbol: LRRC4C
LRRC4C
0.010 Biomarker disease BEFREE Netrin-G ligand-1 (NGL-1), encoded by <i>Lrrc4c</i>, is a post-synaptic adhesion molecule implicated in various brain disorders, including bipolar disorder, autism spectrum disorder, and developmental delay. 31680855 2019
Entrez Id: 4905
Gene Symbol: NSF
NSF
0.300 Biomarker disease GENOMICS_ENGLAND De novo NSF mutations cause early infantile epileptic encephalopathy. 31675180 2019
Entrez Id: 84628
Gene Symbol: NTNG2
NTNG2
0.320 Biomarker disease GENOMICS_ENGLAND Homozygous Missense Variants in NTNG2, Encoding a Presynaptic Netrin-G2 Adhesion Protein, Lead to a Distinct Neurodevelopmental Disorder. 31668703 2019
Entrez Id: 84628
Gene Symbol: NTNG2
NTNG2
0.320 GeneticVariation disease BEFREE In this study, through a combination of exome sequencing and autozygosity mapping, we have identified 16 individuals (from seven unrelated families) with ultra-rare homozygous missense variants in NTNG2; these individuals present with shared features of a neurodevelopmental disorder consisting of global developmental delay, severe to profound intellectual disability, muscle weakness and abnormal tone, autistic features, behavioral abnormalities, and variable dysmorphisms. 31668703 2019
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.180 GeneticVariation disease BEFREE We have identified novel Hh pathway mutations and structural copy number variations in individuals with somatic overgrowth, macrocephaly, dysmorphic facial features, and developmental delay, which phenotypically closely resemble patients with phosphatase and tensin homolog (PTEN) mutations. 31639285 2019
Entrez Id: 5833
Gene Symbol: PCYT2
PCYT2
0.310 GeneticVariation disease BEFREE We identified five individuals with biallelic PCYT2 variants clinically characterized by global developmental delay with regression, spastic para- or tetraparesis, epilepsy and progressive cerebral and cerebellar atrophy. 31637422 2019